Package: SAFARI 0.1.1

SAFARI: Shape Analysis for AI-Reconstructed Images

Provides functionality for image processing and shape analysis in the context of reconstructed medical images generated by deep learning-based methods or standard image processing algorithms and produced from different medical imaging types, such as X-ray, Computational Tomography (CT), Magnetic Resonance Imaging (MRI), and pathology imaging. Specifically, offers tools to segment regions of interest and to extract quantitative shape descriptors for applications in signal processing, statistical analysis and modeling, and machine learning.

Authors:Esteban Fernandez [aut, cre], Qiwei Li [aut]

SAFARI_0.1.1.tar.gz
SAFARI_0.1.1.zip(r-4.5)SAFARI_0.1.1.zip(r-4.4)SAFARI_0.1.1.zip(r-4.3)
SAFARI_0.1.1.tgz(r-4.4-any)SAFARI_0.1.1.tgz(r-4.3-any)
SAFARI_0.1.1.tar.gz(r-4.5-noble)SAFARI_0.1.1.tar.gz(r-4.4-noble)
SAFARI_0.1.1.tgz(r-4.4-emscripten)SAFARI_0.1.1.tgz(r-4.3-emscripten)
SAFARI.pdf |SAFARI.html✨
SAFARI/json (API)
NEWS

# Install 'SAFARI' in R:
install.packages('SAFARI', repos = c('https://estfernan.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/estfernandez/safari/issues

Datasets:
  • rBPS - Reconstructed Binary Pathology Slide

On CRAN:

reconstructed-imagesshape-analysis

3.90 score 2 stars 6 scripts 163 downloads 8 mentions 4 exports 40 dependencies

Last updated 2 years agofrom:640b3cb66d. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 16 2024
R-4.5-winOKNov 16 2024
R-4.5-linuxOKNov 16 2024
R-4.4-winOKNov 16 2024
R-4.4-macOKNov 16 2024
R-4.3-winOKNov 16 2024
R-4.3-macOKOct 17 2024

Exports:binary.segmentationcompute.featuresrc.plotread.image

Dependencies:abindbase64encBiocGenericsbitopsbslibcachemcaToolsclidigestEBImageevaluatefastmapfftwtoolsfontawesomefsgenericsgluehighrhtmltoolshtmlwidgetsjpegjquerylibjsonliteknitrlatticelifecyclelocfitmemoisemimepngR6rappdirsRCurlrlangrmarkdownsasstifftinytexxfunyaml