Package: SAFARI 0.1.1

SAFARI: Shape Analysis for AI-Reconstructed Images

Provides functionality for image processing and shape analysis in the context of reconstructed medical images generated by deep learning-based methods or standard image processing algorithms and produced from different medical imaging types, such as X-ray, Computational Tomography (CT), Magnetic Resonance Imaging (MRI), and pathology imaging. Specifically, offers tools to segment regions of interest and to extract quantitative shape descriptors for applications in signal processing, statistical analysis and modeling, and machine learning.

Authors:Esteban Fernandez [aut, cre], Qiwei Li [aut]

SAFARI_0.1.1.tar.gz
SAFARI_0.1.1.zip(r-4.5)SAFARI_0.1.1.zip(r-4.4)SAFARI_0.1.1.zip(r-4.3)
SAFARI_0.1.1.tgz(r-4.5-any)SAFARI_0.1.1.tgz(r-4.4-any)
SAFARI_0.1.1.tar.gz(r-4.5-noble)SAFARI_0.1.1.tar.gz(r-4.4-noble)
SAFARI_0.1.1.tgz(r-4.4-emscripten)SAFARI_0.1.1.tgz(r-4.3-emscripten)
SAFARI.pdf |SAFARI.html✨
SAFARI/json (API)
NEWS

# Install 'SAFARI' in R:
install.packages('SAFARI', repos = c('https://estfernan.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/estfernandez/safari/issues

Datasets:
  • rBPS - Reconstructed Binary Pathology Slide

On CRAN:

Conda:

reconstructed-imagesshape-analysis

3.90 score 2 stars 6 scripts 138 downloads 8 mentions 4 exports 40 dependencies

Last updated 3 years agofrom:640b3cb66d. Checks:8 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 16 2025
R-4.5-winOKMar 16 2025
R-4.5-macOKMar 16 2025
R-4.5-linuxOKMar 16 2025
R-4.4-winOKMar 16 2025
R-4.4-macOKMar 16 2025
R-4.4-linuxOKMar 16 2025
R-4.3-winOKMar 16 2025

Exports:binary.segmentationcompute.featuresrc.plotread.image

Dependencies:abindbase64encBiocGenericsbitopsbslibcachemcaToolsclidigestEBImageevaluatefastmapfftwtoolsfontawesomefsgenericsgluehighrhtmltoolshtmlwidgetsjpegjquerylibjsonliteknitrlatticelifecyclelocfitmemoisemimepngR6rappdirsRCurlrlangrmarkdownsasstifftinytexxfunyaml